from django.core.management.base import BaseCommand, CommandError from datetime import date from heasarc.models import INPUT_DATA_DIR import datetime from django.utils import timezone import astropy from astropy.io import ascii import pandas as pd import pymysql from sqlalchemy import create_engine from heasarc.tdat import tDat from heasarc.models import HeasarcTable, TableColumn, HeasarcObjectClass def load_heasarc_table(filename, engine): tdatfile=INPUT_DATA_DIR+'/dump/'+filename data = astropy.table.Table.read(tdatfile, format='ascii.tdat') keywords = data.meta['keywords'] for key, value in keywords.items(): print(key, '->', value) try: table=HeasarcTable.objects.get(name__exact=keywords['table_name']) table.delete() except: pass table_name=keywords['table_name'] table = HeasarcTable(name=keywords['table_name']) table.description=keywords['table_description'].replace('\"', '') table.document_url=keywords['table_document_url'] if 'default_search_radius' in keywords: table.search_radius=int(keywords['default_search_radius']) if 'frequency_regime' in keywords: table.frequency_regime=keywords['frequency_regime'] table.observatory_name=keywords['observatory_name'] table.security=keywords['table_security'] if 'table_author' in keywords: table.author=keywords['table_author'] if 'catalog_bibcode' in keywords: table.bibcode=keywords['catalog_bibcode'] if 'declination' in keywords: table.declination=keywords['declination'].replace('@', '') if 'right_ascension' in keywords: table.right_ascension=keywords['right_ascension'].replace('@', '') table.observatory_name = keywords['observatory_name'] if 'parameter_defaults' in keywords: table.parameter_defaults = keywords['parameter_defaults'] table.save() cols = data.meta['cols'] for key, value in cols.items(): column = TableColumn(table=table) column.name=key column.tdat_type=value['type'] column.description=value['description'] column.save() print(key, '->', value) # convert data frame to pandas df = data.to_pandas() sql = 'DROP TABLE IF EXISTS '+table_name+';' result = engine.execute(sql) # Insert whole DataFrame into MySQL df.to_sql(table_name, con = engine, if_exists = 'append', chunksize = 200000) for item in data: obj = HeasarcObjectClass(table=table, class_id=int(item['class_id']), class_name=item['class_name']) obj.save() print('--> Successfully loaded "%s"' % table_name) pass class Command(BaseCommand): help = 'Initiates data dase' # def add_arguments(self, parser): # parser.add_argument('poll_id', nargs='+', type=int) def handle(self, *args, **options): load_heasarc_table('heasarc_class.tdat.gz', engine) self.stdout.write(self.style.SUCCESS('Done'))