forked from xmm/arches
78 lines
2.1 KiB
Python
Executable File
78 lines
2.1 KiB
Python
Executable File
#!/usr/bin/env python
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from pysas.wrapper import Wrapper as w
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import os, sys
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from os.path import dirname
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import inspect
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import glob
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import os.path
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from os import path
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import subprocess
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import numpy as np
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import matplotlib.pyplot as plt
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from astropy.io import fits
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from astropy.table import Table
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from matplotlib.colors import LogNorm
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import re
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import pyds9
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import arches
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from arches.utils import *
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from arches.config import *
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root_path=dirname(dirname(dirname(inspect.getfile(arches))))
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print("Arches root path: {}".format(root_path))
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fwc_dir=root_path+'/data/FWC'
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archive_dir=root_path+'/data/archive'
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events_dir=root_path+'/data/processed'
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events_dir_oot=root_path+'/data/processed-oot'
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products_dir=root_path+'/products/sas'
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ds9reg_dir=root_path+'/data/ds9reg'
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create_folder(products_dir)
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inargs = ['--version']
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t = w('sasver', inargs)
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t.run()
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files = glob.glob(archive_dir+'/*')
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for obsid in files:
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obsid = os.path.basename(obsid)
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if(obsid in skip):
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continue
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work_dir = init_work_dir(obsid, products_dir=products_dir)
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os.chdir(work_dir)
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#
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# https://www.cosmos.esa.int/web/xmm-newton/sas-thread-images
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#
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attfile = get_first_file(events_dir+f'/{obsid}/*{obsid}_AttHk.ds')
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for key in ['MOS1','MOS2','PN']:
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evtfile = get_first_file(events_dir+f'/{obsid}/*{obsid}_E{key}*_ImagingEvts.ds')
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fwcfile = get_first_file(fwc_dir+f'/{key}_closed_FF_2025_v1.fits')
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pimin=" ".join(emin)
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pimax=" ".join(emax)
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gti=f'EPIC_{key}_gti.fit'
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sci_clean=work_dir+f'/EPIC_{key}_filtered.fits' # Name of the output file
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inargs = [f'evtfile={evtfile}','withemtaglenoise=no',
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f'fwcfile={fwcfile}','withfwcimages=yes',
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f'gtifile={gti}',
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f'attfile={attfile}',
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f'pimin={pimin}',
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f'pimax={pimax}',
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]
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if(key=='PN'):
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evtfile_oot = get_first_file(events_dir_oot+f'/{obsid}/*{obsid}_E{key}*_ImagingEvts.ds')
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inargs.append(f'ootfile={evtfile_oot}')
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w("eimageget", inargs).run()
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#sys.exit()
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